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Shashikant (Shashi) Kulkarni, PhD, MS, FACMG

Associate Professor, Pathology & Immunology
Associate Professor, Pediatrics
Associate Professor, Genetics

Director, Cytogenomics and Molecular Pathology
Medical Director, Genomics and Pathology Services

Specialty Areas

Pathology
Cytogenetics
Molecular Pathology

Board Certifications

Medical Genetics

Hospital Affiliations

Barnes-Jewish Hospital

Areas of Clinical Interest

Clinical genomics, molecular pathology, cytogenomics

  • Education
  • Publication & Research

Education

Education

Fellowship, Cancer Genomics, Hematology: Hammersmith Hospital, Imperial College School of Medicine, London, UK 2000
BS, Biology and Life Sciences: Government College, Kota, India 1988
PhD, Medical Genetics: All India Institute of Medical Sciences, New Delhi, India 1997
MS, Medicine - Human Anatomy: SMS Medical College, Jaipur, India 1992
Research Fellow, Developmental Genome Anatomy: Harvard Medical School, Boston, MA 2006
Clinical Fellow, Genetics: Harvard Medical School, Boston, MA 2004

Publication & Research

Publication & Research

GSyellow, a Swiss-Knife Tag for Functional Protein Analysis in Monocot and Dicot Plants.
Besbrugge N, Van Leene J, Eeckhout D, Cannoot B, Kulkarni SR, De Winne N, Persiau G, Van De Slijke E, Bontinck M, Aesaert S, Impens F, Gevaert K, van Damme D, Van Lijsebettens M, Inze D, Vandepoele K, Nelissen H, De Jaeger G
Plant Physiol. 2018 Apr 20; pii: pp.00175.2018. doi: 10.1104/pp.18.00175.

PMID:
    29678859
    [PubMed - as supplied by publisher]
Related citations


In silico toxicology protocols.
Myatt GJ, Ahlberg E, Akahori Y, Allen D, Amberg A, Anger LT, Aptula A, Auerbach S, Beilke L, Bellion P, Benigni R, Bercu J, Booth ED, Bower D, Brigo A, Burden N, Cammerer Z, Cronin MTD, Cross KP, Custer L, Dettwiler M, Dobo K, Ford KA, Fortin MC, Gad-McDonald SE, Gellatly N, Gervais V, Glover KP, Glowienke S, Van Gompel J, Gutsell S, Hardy B, Harvey JS, Hillegass J, Honma M, Hsieh JH, Hsu CW, Hughes K, Johnson C, Jolly R, Jones D, Kemper R, Kenyon MO, Kim MT, Kruhlak NL, Kulkarni SA, Kümmerer K, Leavitt P, Majer B, Masten S, Miller S, Moser J, Mumtaz M, Muster W, Neilson L, Oprea TI, Patlewicz G, Paulino A, Lo Piparo E, Powley M, Quigley DP, Reddy MV, Richarz AN, Ruiz P, Schilter B, Serafimova R, Simpson W, Stavitskaya L, Stidl R, Suarez-Rodriguez D, Szabo DT, Teasdale A, Trejo-Martin A, Valentin JP, Vuorinen A, Wall BA, Watts P, White AT, Wichard J, Witt KL, Woolley A, Woolley D, Zwickl C, Hasselgren C
Regul Toxicol Pharmacol. 2018 Apr 17; pii: S0273-2300(18)30114-4. doi: 10.1016/j.yrtph.2018.04.014.

PMID:
    29678766
    [PubMed - as supplied by publisher]
Related citations


A rare case of Ewing's sarcoma/primitive neuroectodermal tumor metastasizing to left atrium through left inferior pulmonary vein.
Kulkarni SK, Moorthy N, Somanna S, Cholenahally Nanjappa M
Echocardiography. 2018 Apr 20; doi: 10.1111/echo.13897.

PMID:
    29676474
    [PubMed - as supplied by publisher]
Related citations


Moyamoya Vasculopathy in Indian Children: Our Experience.
Patil VA, Kulkarni SD, Deopujari CE, Biyani NK, Udwadia-Hegde AH, Shah KN
J Pediatr Neurosci. 2017 Oct-Dec; 12(4)320-327. doi: 10.4103/jpn.JPN_65_17.

PMID:
    29675069
    [PubMed]
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Spiking neural networks for handwritten digit recognition-Supervised learning and network optimization.
Kulkarni SR, Rajendran B
Neural Netw. 2018 Apr 6; 103118-127. doi: 10.1016/j.neunet.2018.03.019.

PMID:
    29674234
    [PubMed - as supplied by publisher]
Related citations


Introducing interventional radiology through a longitudinal clinical clerkship.
Kulkarni S, Farooq Z
Adv Med Educ Pract. 2018; 9215-216. doi: 10.2147/AMEP.S161073.

PMID:
    29664472
    [PubMed]
Related citations


Resolved versus confirmed ARDS after 24 h: insights from the LUNG SAFE study.
Madotto F, Pham T, Bellani G, Bos LD, Simonis FD, Fan E, Artigas A, Brochard L, Schultz MJ, Laffey JG, LUNG SAFE Investigators and the ESICM Trials Group.
Intensive Care Med. 2018 Apr 9; doi: 10.1007/s00134-018-5152-6.

PMID:
    29632996
    [PubMed - as supplied by publisher]
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Pathogenic Germline Variants in 10,389 Adult Cancers.
Huang KL, Mashl RJ, Wu Y, Ritter DI, Wang J, Oh C, Paczkowska M, Reynolds S, Wyczalkowski MA, Oak N, Scott AD, Krassowski M, Cherniack AD, Houlahan KE, Jayasinghe R, Wang LB, Zhou DC, Liu D, Cao S, Kim YW, Koire A, McMichael JF, Hucthagowder V, Kim TB, Hahn A, Wang C, McLellan MD, Al-Mulla F, Johnson KJ, Cancer Genome Atlas Research Network., Lichtarge O, Boutros PC, Raphael B, Lazar AJ, Zhang W, Wendl MC, Govindan R, Jain S, Wheeler D, Kulkarni S, Dipersio JF, Reimand J, Meric-Bernstam F, Chen K, Shmulevich I, Plon SE, Chen F, Ding L
Cell. 2018 Apr 5; 173(2)355-370.e14. doi: 10.1016/j.cell.2018.03.039.

PMID:
    29625052
    [PubMed - in process]
Related citations


Cortical laminar necrosis in a case of migrainous cerebral infarction.
Khardenavis V, Karthik DK, Kulkarni S, Deshpande A
BMJ Case Rep. 2018 Mar 28; 2018pii: bcr-2017-221483. doi: 10.1136/bcr-2017-221483.

PMID:
    29592973
    [PubMed - in process]
Related citations


Micro-habitat distribution drives patch quality for sub-tropical rocky plateau amphibians in the northern Western Ghats, India.
Thorpe CJ, Lewis TR, Kulkarni S, Watve A, Gaitonde N, Pryce D, Davies L, Bilton DT, Knight ME
PLoS One. 2018; 13(3)e0194810. doi: 10.1371/journal.pone.0194810.

PMID:
    29579111
    [PubMed - in process]
Related citations


Enhancing the learning experience of embryology for medical students.
Patel CR, Maleki A, Kulkarni S
Adv Med Educ Pract. 2018; 9139-141. doi: 10.2147/AMEP.S160915.

PMID:
    29536988
    [PubMed]
Related citations


Physiological Regulation of Drug Metabolism and Transport: Pregnancy, Microbiome, Inflammation, Infection, and Fasting.
Morgan ET, Dempsey JL, Mimche SM, Lamb TJ, Kulkarni S, Cui JY, Jeong H, Slitt AL
Drug Metab Dispos. 2018 May; 46(5)503-513. doi: 10.1124/dmd.117.079905.

PMID:
    29514828
    [PubMed - in process]
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Anterolateral Ligament Injury in Knee Dislocations.
Marwan Y, Kulkarni S, Addar A, Algarni N, Tamimi I, Boily M, Martineau PA
Arthroscopy. 2018 Mar 3; pii: S0749-8063(18)30050-1. doi: 10.1016/j.arthro.2018.01.020.

PMID:
    29510889
    [PubMed - as supplied by publisher]
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Induced Pluripotent Stem Cells and Precision Medicine in Human Liver Disease.
Kulkarni S, Rudnick DA
J Pediatr Gastroenterol Nutr. 2018 Mar 5; doi: 10.1097/MPG.0000000000001948.

PMID:
    29509632
    [PubMed - as supplied by publisher]
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Molecular basis of weak D expression in the Indian population and report of a novel, predominant variant RHD allele.
Fichou Y, Parchure D, Gogri H, Gopalkrishnan V, Le Maréchal C, Chen JM, Férec C, Madkaikar M, Ghosh K, Kulkarni S
Transfusion. 2018 Feb 25; doi: 10.1111/trf.14552.

PMID:
    29479713
    [PubMed - as supplied by publisher]
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A rapid review of treatment literacy materials for tuberculosis patients.
Brumwell A, Noyes E, Kulkarni S, Lin V, Becerra MC, Yuen CM
Int J Tuberc Lung Dis. 2018 Mar 1; 22(3)336-341. doi: 10.5588/ijtld.17.0363.

PMID:
    29471913
    [PubMed - in process]
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Vitamin D Supplementation in Adults with Vitamin D Deficiency and Its Effect on Metabolic Syndrome - A Randomized Controlled Study.
Mahmood SF, Idiculla J, Joshi R, Joshi S, Kulkarni S
Int J Vitam Nutr Res. 2018 Feb 22; 1-6. doi: 10.1024/0300-9831/a000426.

PMID:
    29469682
    [PubMed - as supplied by publisher]
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Determining Caries Activity Using Oratest Among 12-to 15-year-old Children.
Ambati SA, Kulkarni S, Doshi D, Reddy MP, Reddy S
Oral Health Prev Dent. 2018; 16(1)93-96. doi: 10.3290/j.ohpd.a39819.

PMID:
    29459909
    [PubMed - in process]
Related citations


HIV-Related Stigma, Social Support, and Psychological Distress Among Individuals Initiating ART in Ethiopia.
Parcesepe A, Tymejczyk O, Remien R, Gadisa T, Kulkarni SG, Hoffman S, Melaku Z, Elul B, Nash D
AIDS Behav. 2018 Feb 16; doi: 10.1007/s10461-018-2059-8.

PMID:
    29453552
    [PubMed - as supplied by publisher]
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Synthesis and Characterization of Controlled Size CdSe Quantum Dots by Colloidal Method.
Bhand GR, Lakhe MG, Rohom AB, Londhe PU, Kulkarni SK, Chaure NB
J Nanosci Nanotechnol. 2018 Apr 1; 18(4)2695-2701. doi: 10.1166/jnn.2018.14329.

PMID:
    29442945
    [PubMed]
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