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Shashikant (Shashi) Kulkarni, PhD, MS, FACMG

Associate Professor, Pathology & Immunology
Associate Professor, Pediatrics
Associate Professor, Genetics

Director, Cytogenomics and Molecular Pathology
Medical Director, Genomics and Pathology Services

Specialty Areas

Pathology
Cytogenetics
Molecular Pathology

Board Certifications

Medical Genetics

Hospital Affiliations

Barnes-Jewish Hospital

Areas of Clinical Interest

Clinical genomics, molecular pathology, cytogenomics

  • Education
  • Publication & Research

Education

Education

Fellowship, Cancer Genomics, Hematology: Hammersmith Hospital, Imperial College School of Medicine, London, UK 2000
BS, Biology and Life Sciences: Government College, Kota, India 1988
PhD, Medical Genetics: All India Institute of Medical Sciences, New Delhi, India 1997
MS, Medicine - Human Anatomy: SMS Medical College, Jaipur, India 1992
Research Fellow, Developmental Genome Anatomy: Harvard Medical School, Boston, MA 2006
Clinical Fellow, Genetics: Harvard Medical School, Boston, MA 2004

Publication & Research

Publication & Research

Race, Risk, and Willingness of End-stage Renal Disease Patients Without Hepatitis C (HCV) to Accept an HCV-infected Kidney Transplant.
McCauley M, Mussell A, Goldberg D, Sawinski D, Molina RN, Tomlin R, Doshi SD, Abt P, Bloom R, Blumberg E, Kulkarni S, Esnaola G, Shults J, Thiessen C, Reese PP
Transplantation. 2018 Jan 18; doi: 10.1097/TP.0000000000002099.

PMID:
    29346260
    [PubMed - as supplied by publisher]
Related citations


Responding to student preferences: a balancing act.
Kulkarni S, Khan AHA
Clin Teach. 2018 Feb; 15(1)83. doi: 10.1111/tct.12725.

PMID:
    29333759
    [PubMed - in process]
Related citations


Genomic heterogeneity of ALK fusion breakpoints in non-small-cell lung cancer.
Rosenbaum JN, Bloom R, Forys JT, Hiken J, Armstrong JR, Branson J, McNulty S, Velu PD, Pepin K, Abel H, Cottrell CE, Pfeifer JD, Kulkarni S, Govindan R, Konnick EQ, Lockwood CM, Duncavage EJ
Mod Pathol. 2018 Jan 12; doi: 10.1038/modpathol.2017.181.

PMID:
    29327716
    [PubMed - as supplied by publisher]
Related citations


Association of Glycemic Status with Bone Turnover Markers in Type 2 Diabetes Mellitus.
Kulkarni SV, Meenatchi S, Reeta R, Ramesh R, Srinivasan AR, Lenin C
Int J Appl Basic Med Res. 2017 Oct-Dec; 7(4)247-251. doi: 10.4103/ijabmr.IJABMR_35_17.

PMID:
    29308363
    [PubMed]
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Playing by the Rules: Agency Policy and Procedure in Service Experience of IPV Survivors.
Wood L, Cook Heffron L, Voyles M, Kulkarni S
J Interpers Violence. 2017 Jun 1; 886260517716945. doi: 10.1177/0886260517716945.

PMID:
    29294811
    [PubMed - as supplied by publisher]
Related citations


RAPGEF5 Regulates Nuclear Translocation of β-Catenin.
Griffin JN, Del Viso F, Duncan AR, Robson A, Hwang W, Kulkarni S, Liu KJ, Khokha MK
Dev Cell. 2017 Dec 27; pii: S1534-5807(17)30986-3. doi: 10.1016/j.devcel.2017.12.001.

PMID:
    29290587
    [PubMed - as supplied by publisher]
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Transition probabilities between changing sensitization levels, waitlist activity status and competing-risk kidney transplant outcomes using multi-state modeling.
Kulkarni S, Hall I, Formica R, Thiessen C, Stewart D, Gan G, Greene E, Deng Y
PLoS One. 2017; 12(12)e0190277. doi: 10.1371/journal.pone.0190277.

PMID:
    29287087
    [PubMed - in process]
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Chloracne in a Farming Family.
Kushwaha P, Kumar H, Kulkarni S, Ghorpade A
Skinmed. 2017; 15(6)485-488.

PMID:
    29282195
    [PubMed - in process]
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TF2Network: predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information.
Kulkarni SR, Vaneechoutte D, Van de Velde J, Vandepoele K
Nucleic Acids Res. 2017 Dec 20; doi: 10.1093/nar/gkx1279.

PMID:
    29272447
    [PubMed - as supplied by publisher]
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A mildly relativistic wide-angle outflow in the neutron-star merger event GW170817.
Mooley KP, Nakar E, Hotokezaka K, Hallinan G, Corsi A, Frail DA, Horesh A, Murphy T, Lenc E, Kaplan DL, De K, Dobie D, Chandra P, Deller A, Gottlieb O, Kasliwal MM, Kulkarni SR, Myers ST, Nissanke S, Piran T, Lynch C, Bhalerao V, Bourke S, Bannister KW, Singer LP
Nature. 2017 Dec 20; doi: 10.1038/nature25452.

PMID:
    29261643
    [PubMed - as supplied by publisher]
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Authors' Reply.
Li MM, Datto M, Duncavage EJ, Kulkarni S, Lindeman NI, Roy S, Tsimberidou AM, Vnencak-Jones CL, Wolff DJ, Younes A, Nikiforova MN
J Mol Diagn. 2018 Jan; 20(1)125-126. doi: 10.1016/j.jmoldx.2017.11.002.

PMID:
    29249244
    [PubMed - in process]
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Assessing Living Donor Priorities Through Nominal Group Technique.
Dorflinger LM, Kulkarni S, Thiessen C, Klarman S, Fraenkel L
Prog Transplant. 2017 Jan 1; 1526924817746682. doi: 10.1177/1526924817746682.

PMID:
    29243533
    [PubMed - as supplied by publisher]
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Antibiotic susceptibility pattern of Neisseria gonorrhoeae strains isolated from five cities in India during 2013-2016.
Kulkarni SV, Bala M, Muqeeth SA, Sasikala G, Nirmalkar AP, Thorat R, Kambli H, Sawant J, Risbud A, Gangakhedkar RR, Godbole SV
J Med Microbiol. 2018 Jan; 67(1)22-28. doi: 10.1099/jmm.0.000662.

PMID:
    29231153
    [PubMed - indexed for MEDLINE]
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A Human-Centered Platform for HIV Infection Reduction in New York: Development and Usage Analysis of the Ending the Epidemic (ETE) Dashboard.
Joshi A, Amadi C, Katz B, Kulkarni S, Nash D
JMIR Public Health Surveill. 2017 Dec 11; 3(4)e95. doi: 10.2196/publichealth.8312.

PMID:
    29229592
    [PubMed]
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ClinGen Cancer Somatic Working Group - standardizing and democratizing access to cancer molecular diagnostic data to drive translational research.
Madhavan S, Ritter D, Micheel C, Rao S, Roy A, Sonkin D, Mccoy M, Griffith M, Griffith OL, Mcgarvey P, Kulkarni S
Pac Symp Biocomput. 2018; 23247-258.

PMID:
    29218886
    [PubMed - in process]
Related citations


Comparative Evaluation of Antiplaque Efficacy of Coconut Oil Pulling and a Placebo, Among Dental College Students: A Randomized Controlled Trial.
Nagilla J, Kulkarni S, Madupu PR, Doshi D, Bandari SR, Srilatha A
J Clin Diagn Res. 2017 Sep; 11(9)ZC08-ZC11. doi: 10.7860/JCDR/2017/26656.10563.

PMID:
    29207824
    [PubMed]
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eIF1A residues implicated in cancer stabilize translation preinitiation complexes and favor suboptimal initiation sites in yeast.
Martin-Marcos P, Zhou F, Karunasiri C, Zhang F, Dong J, Nanda J, Kulkarni SD, Sen ND, Tamame M, Zeschnigk M, Lorsch JR, Hinnebusch AG
Elife. 2017 Dec 5; 6pii: e31250. doi: 10.7554/eLife.31250.

PMID:
    29206102
    [PubMed - in process]
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A novel method in decision making for the diagnosis of anterior urethral stricture: using methylene blue dye.
Joshi P, Kaya C, Surana S, Desai DJ, Orabi H, Iyer S, Kulkarni SB
Turk J Urol. 2017 Dec; 43(4)502-506. doi: 10.5152/tud.2017.72368.

PMID:
    29201515
    [PubMed]
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Liver resection for HCC outside the BCLC criteria.
Bhandare MS, Patkar S, Shetty N, Polnaya A, Kulkarni S, Dusane RR, Shrikhande SV, Goel M
Langenbecks Arch Surg. 2017 Dec 4; doi: 10.1007/s00423-017-1640-3.

PMID:
    29199380
    [PubMed - as supplied by publisher]
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Self perceived psychosocial impact of dental aesthetics among young adults: a cross sectional questionnaire study.
Chakradhar K, Doshi D, Kulkarni S, Reddy BS, Reddy S, Srilatha A
Int J Adolesc Med Health. 2017 Nov 23; pii: /j/ijamh.ahead-of-print/ijamh-2017-0129/ijamh-2017-0129.xml. doi: 10.1515/ijamh-2017-0129.

PMID:
    29168971
    [PubMed - as supplied by publisher]
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